Jill, in your description you request to clone but in the same time, you request to have a single administration and in fact you would like to share the sobipro content.
With JMS, you can share a limited number of extension content. SobiPro is one of them.
See the list of extension defined in our JMS tool menu.
www.jms2win.com/en/list-of-extensions?vi...id=269&Itemid=53
The concept of JMS is based on the sharing and NOT on the replication or duplication of content that require "synchronization". JMS does NOT contain anything to synchronize the content.
When you share the content of an extension, you have all the MySQL tables used by this extension that are physically shared between the websites. So that, the content is present only once and not duplicated. (So no need of synchronization).
When you share SOBI Pro, you also share the Joomla users.
When an extension is shared, it can be managed from any websites.
Concerning the update/upgrade of joomla or extension, you have to distinguish the update or an upgrade.
The update generally mean bug fix and does NOT change any table structure or data inside the DB. In this case, you can update the extension (or joomla) only once.
The upgrade can change the DB table structure or modify the table content. In this case, you need to re-apply the upgrade on the other websites to ajust the DB structure.
With JMS 1.3.x, there is a new "maintenance" menu that help to the verification of the DB structure to ensure that it is correct on all the sites. With Joomla 2.5, you have inside Joomla / extension maanger a database "fix" button that allow fix the joomla structure itself.