If you just have "ignore" and "copy" this mean that you don't have the symbolic link allowed (probably working on a Windows platform).
If your current setting is "ignore", and that you didn't setup the deploy folder (or field nor present), then you can do a backup of your master website directory as it is the same (ignored) for the slave site.
If you have ignored and copy action, this mean that you can NOT have any symbolic link on your server OR that you changed your server configuration to forbid the symbolic links.
If you have symbolic link present, then you have to fix your server configuration to restore the symbolic link functionality.
See also the tutorial video 7 to check the symbolic links.
Do not delete the symbolic link if you are not able to rebuilt them (as the action are just "ignore" and "copy".
If you want that we have a look on your server and do the copy for you, this is also possible with our billable support that you can order at
www.jms2win.com/en/joomla-multisite?page...35&category_id=1